蛋白质工程课题组
研究方向:
1. 工业酶的改造及应用
2. 水产动物免疫机制及病害防御
3. 植物代谢网络调控研究
4. 病原微生物、疫苗和诊断试剂方面的研究
团队成员:
喻雪婧 朱蓉 李洋 陈凡
喻雪婧
一、基本信息
喻雪婧,博士、副教授、硕士生导师,入选2014年湖北省“楚天学子”。
办公电话:15107169686
电子邮件:xuejing.yu@hubu.edu.cn
研究领域:主要从事生物催化、酶工程、酶结构解析等领域的研究
二、教育背景
2010/09-2014/09, 爱尔兰国立都柏林大学,康威研究院,博士,生物化学专业
2007/09-2010/09, 湖北大学,3344体育会员, 硕士,生物化学与分子生物学专业
2003/09-2007/06, 湖北大学,3344体育会员,学士,生物工程专
三、工作经历
2015/07-至今, 湖北大学,3344体育会员,副教授
2020/07-2021/06,武汉朗来科技有限公司,科技副总
2014/11-2015/07,湖北大学,3344体育会员,讲师
2009/05-2010/04,爱尔兰国立都柏林大学,康威研究院,科研助理
四、主持参与的科研项目
1. 国家重点研发计划子课题,2019YFA0706900,2020.01-2024.12,主持
2. 企业合作开发项目,2022-2024
3. 中国博士后科学基金第67批面上资助二等,2020M672433,2020.07-2021.12,主持
4. 湖北省自然科学基金青年基金,2017CFB158,酶法制备手性非天然氨基酸,2017.05-2019.08,主持
5. 湖北省教育厅重点项目,D201605,利用分子对接技术筛选酪氨酸酶抑制剂,2016. 01-2019.10,主持
6. 湖北大学校基金,201611073000006,多酶催化剂不对称合成(2S,3R)-L-别异亮氨酸,2016.11-2017.11,主持
7. 湖北省人才项目"楚天学子"配套经费, 080/091490,2015.01-2019.12,主持
8. 国家自然科学基金面上项目,30970076,磷脂酰胆碱合成酶基因在细菌致病性中的作用与机理,2010.01-2012.12,参与
五、发表主要论文:
1. Lei, J., Zhang Y., Ni, XC., Yu X.*, Wang, XG.*, Degradation of epigallocatechin and epicatechin gallates by a novel tannase TanHcw from Herbaspirillum camelliae. Microbial Cell Factories. (accepted) 2021 (通讯作者)(IF 5.5)
2. Chen, C. C. #, Yu, X. #, Kuo, C. J.#, Min, J., Chen, S., Wu, S., Ma, L.*, Liu, K.*, Guo, R. T.* Overview of antiviral drug candidates targeting coronaviral 3C-like main proteases. FEBS J. 2021 doi: 10.1111/febs.15696. (共同一作)(IF 4.39)
3. Chen, C., Min, J., Zhang, L., Yang, Y., Yu, X.*, Guo, R.*, 2020. Advanced understanding of the electron transfer pathway of cytochrome P450s. ChemBioChem,2020,21,1-13. (通讯作者)(IF 2.63)
4. Hu, Y. #; Min, J. #; Qu, Y.; Zhang, X.; Zhang, J. *; Yu, X.*; Dai, L*. Biocatalytic synthesis of calycosin-7-O-β-D-Glucoside with uridine diphosphate–glucose regeneration system. Catalysts 2020, 10, 258. (通讯作者)(IF 4.1)
5. Zhang L, Xie Z, Liu Z, Zhou S, Ma L, Liu W, Huang J-W, Ko T-P, Li X, Hu Y, Min J, Yu X, Guo R-T, Chen C-C. Structural insight into the electron transfer pathway of a self-sufficient P450 monooxygenase. Nature Communications 2020, 11(1): 2676. (1区TOP, 影响因子12.12)
6. Chen C-C, Zhang L, Yu X, Ma L, Ko T-P, Guo R-T. Versatile cis-isoprenyl Diphosphate Synthase Superfamily Members in Catalyzing Carbon-Carbon Bond Formation. ACS Catalysis 2020, 10(8): 4717-4725. (1区TOP, 影响因子12.35)
7. Chen, C. C.#, Xue, J. #, Peng, W. #, Wang, B., Zhang, L., Liu, W., Ko, T. P, Huang, J. W., Zhou, S., Min, J., Ma, L., Dai, L.*, Guo, R.T.*, Yu, X.* Structural insights into thebaine synthase 2 catalysis. Biochemical and biophysical research communications 2020, 529(2): 156-161. (通讯作者)(IF 3.5)
8. Kuo, C. J., Gao, J., Huang, J. W., Ko, T. P., Zhai, C., Ma, L., Liu, W., Dai, L., Chang, Y. F., Chen, T. H., Hu, Y., Yu, X.*, Guo, R. T.*, Chen, C. C.* Functional and structural investigations of fibronectin-binding protein Apa from Mycobacterium tuberculosis. Biochimica et biophysica acta. General subjects, 2019, 1863 (9), 1351-1359.(通讯作者)(IF 3.77)
9. Ma, J.#, Ko, T. P.#, Yu, X.#, Zhang, L., Ma, L., Zhai, C., Guo, R. T., Liu, W., Li, H., Chen, C. C. * Structural insights to heterodimeric cis-prenyltransferases through yeast dehydrodolichyl diphosphate synthase subunit Nus1. Biochemical and biophysical research communications, 2019, 515 (4), 621-626.(共同一作)(IF 3.5)
10. Feng, Y.#, Yu, X.#, Huang, J. W.#, Liu, W., Li, Q., Hu, Y., Yang, Y., Chen, Y., Jin, J., Li, H., Chen, C. C. *, Guo, R. T. * Crystal structure and proposed mechanism of an enantioselective hydroalkoxylation enzyme from Penicillium herquei. Biochemical and biophysical research communications, 2019, 516 (3), 801-805.(共同一作)(IF 3.5)
11. Yu, X., Wang, X., Engel, P. C.* The specificity and kinetic mechanism of branched-chain amino acid aminotransferase from Escherichia coli studied with a new improved coupled assay procedure and the enzyme's potential for biocatalysis. The FEBS journal, 2014, 281 (1), 391-400. (IF 4.39)
12. Yu, X., Bresser, J., Schall, I., Djurdjevic, I., Buckel, W., Wang, X., Engel, P. C. * Development of a satisfactory and general continuous assay for aminotransferases by coupling with (R)-2-hydroxyglutarate dehydrogenase. Analytical biochemistry, 2012, 431 (2), 127-31. (IF 3.3)
六、指导学生科研立项、创新创业项目及获奖清单
1. (国家级)指导学生参加第二届全国大学生生命科学创新创业大赛,获指导教师一等奖。
2. (国家级)指导学生获批2017年度教育部高等教育司第二批产学合作协同育人项目立项。
3. (省级)指导学生参加湖北省第四届,第五届大学生生物实验技能竞赛获省级一等奖。
4. (校级)指导学生获批2020年度创新创业训练计划项目校级立项。
朱蓉
朱蓉,博士,教授。2006年获中国科学院水生生物研究所博士学位。2014年至今任职于3344体育会员。2019年赴美国杜兰大学访学一年。主要研究方向包括抗病毒因子的功能和应用、抗病毒免疫的分子机制及调控网络、脊椎动物免疫系统发育及演化。先后主持国家自然科学基金项目、国家863计划项目、武汉市应用基础研究项目等。在Journal of Virology等刊物发表研究论文20余篇。担任湖北省生化学会理事。
E-mail:zhurong@hubu.edu.cn
目前承担科研项目
横向课题:医药废水的生物强化处理关键技术研发
近几年代表性论文
1. Liu XX, Lv X, Wu YQ, Song JJ, Wang XG, Zhu R. (2020) Molecular characterization of yellow ctafish (Pelteobagrus fulvidraco) IRF7 suggests involvement in innate immune response. Developmental & Comparative Immunology 109, 103700.
2. Zhu R, Wu YS, Liu XX, Lv X, Wu YQ, Song JJ, Wang XG. (2020) Membrane disruptive antimicrobial potential of NK-lysin from yellow catfish (Pelteobagrus fulvidraco). Fish and Shellfish Immunology 97, 571–580.
3. Zhu R, Liu XX, Lv X, Li SY, Li YD, Yu XJ, Wang XG. (2017) Deciphering transcriptome profile of the yellow catfish (Pelteobagrus fulvidraco) in response to Edwardsiella ictaluri. Fish and Shellfish Immunology 70, 593–608.
4. Zhu R, Du HJ, Li SY, Li YD, Ni H, Yu XJ, Yang YY, Fan YD, Jiang N, Zeng LB, Wang XG. (2016) De novo annotation of the immune-enriched transcriptome provides insights into immune system genes of Chinese sturgeon (Acipenser sinensis). Fish and Shellfish Immunology 2016, 55:699–716.
李洋
李洋,女,1978年2月出生,副教授,硕士研究生导师。
2006年毕业于华中科技大学3344体育会员,获生物医学工程博士学位。
2006年—至今 3344体育会员工作
2012年-2014年 华中农业大学作物遗传改良国家重点实验室从事植物营养代谢研究;
2018-2019年在华盛顿州立大学食品营养与人类健康学院工作,从事营养代谢和皮肤营养研究。拥有营养师资格证书、人社部实训导师证书。擅长活性物质鉴定和营养代谢分析。
承担国家自然科学基金项目3项,省市级项目多项,发表中英文文章10余篇,拥有国家专利1项。
近年承担科研项目情况:
1. 国家自然科学基金青年项目,81500534,口服纳米二氧化硅胶囊包裹草酸降解酶治疗高草酸尿的研究,2016/01-2018/12,17万元,已结题,第一参与人
2. 国家自然科学基金青年项目,31400273,基于水稻代谢组分全基因组关联(mGWAS)的萜烯合酶基因的功能研究,2015/01-2017/12,24万元,已结题,主持
3. 国家自然科学基金青年项目,30801014,我国汉族人群乳腺癌易感基因FGFR2单核苷酸多态性研究,2009/01-2011/12,第一参与人.
4. 武汉市科技局攻关计划项目, 201160823257, 漆酶发酵中试放大及其对果蔬汁澄清效果的研究,2009,1-2011,12,已结题,主持.
专利
李洋,王行国,彭梦,王慧敏. 一种碱性细菌漆酶在酵母中的高通量表达方法.专利号ZL201310563136.9
代表性论文:
1. Jinya Dua, Yuzhi Dongb, Han Liua, Lingli Gonga, Shuang Lua, Changying Yang, Yang Li. Thioflavin T as luminescence biosensors for nucleic acid study and RNase A activity detection. Microchem J. 2019, 147:842-847.(通讯作者)
2. Huan Yang, Musa Male, Yang Li . Efficacy of Hydroxy-L-proline (HYP) Analogues in the Treatment of Primary Hyperoxaluria in Drosophila Melanogaster. BMC Nephrol., 2018, 19:167-178. (共第一)
3. 殷焕然,何玉池,李洋. GC-MS/MS法分析水稻叶子单萜倍半萜类化合物的组成. 生物过程,2017,7(4):54-59.
4. Chen W, Gao Y, Xie W1, Gong L, Lu K, Wang W, Li Y, Liu X3, Zhang H, Dong H, Zhang W, Zhang L, Yu S, Wang G, Lian X, Luo J. (2014) Genome-wide association analyses provide genetic and biochemical insights into natural variation in rice metabolism. Nat Genet. 2014 ,7: 714-721.
5. Deliang Long, Huoguang He, Min Xiong, Yang Li, Wenhua Wu and Xingguo Wang. A soil-dwelling Pseudomonas sp.593 harboring an exogenous hrpZ gene elicits a typical hypersensitive response in tobacco and soybean leaves. International Journal of Microbiology Research,2013, 1:374-380.
6. Yang Li, Wenfeng Zuo, Yadong Li, Xingguo Wang Cloning of Multicopper Oxidase gene from Ochrobactrum sp. 531 and Characterization of its Alkaline Laccase Activity towards Phenolic Substrates. Advances in Biological Chemistry, 2012, 2: 248-255.
4. Yadong Li, Zijun Gong, Xin Li, Yang Li and Xing-Guo Wang. Engineering Klebsiella sp. 601 multicopper oxidase enhances the catalytic efficiency towards phenolic substrates. BMC Biochemistry, 2011,12:30-39.
5. Yang Li, Jiao Yin, Guosheng Qu, Luchao Lv, Yadong Li, Sheng Yang, and Xing-Guo Wang. Gene Cloning, Protein Purification and Enzymatic Properties of Multicopper Oxidase (MCO) from Klebsiella sp. 601. Canadian Journal of Microbiology,2008,54: 725-733.
6. Y. LI, G.X. YANG, L.T. LUO, T. KE, J.R. ZHANG, K.X. LI and G.Y. HE. Aluminium Sensitivity and Tolerance in Model and Elite Wheat Varieties. Cereal Research Communications, 2008, 36:257–267.
7. Liting Luo, Jinrui Zhang, Guangxiao Yang, Yang Li, Kexiu Li, Guangyuan He. Expression of puroindoline a enhances leaf rust resistance in transgenic tetraploid wheat. Mol Biol Rep, 2008,35:195–200.
8. Fan Chen, Qiong Zhao, Xueli Cai, Luchao Lv, Wen Lin, Xuejin Yu, Changyu Li, YangLi, Min Xiong, and Xing-Guo Wang. Phosphatidylcholine in membrane of Escherichia coli changes bacterial antigenicity. Canadian Journal of Microbiology, 2009, 55: 1328-1334.
9. 蔡雪丽, 李洋, 宣文静, 王行国. (2008). 掺入大肠杆菌膜中的磷脂酰胆碱(PC)影响青霉素β-内酰胺酶的分泌. 微生物学报, 48 (4):1-6.
10. 吕露超, 李洋, 王行国. (2007). 抗HPV E7小鼠单克隆抗体与人类宫颈癌细胞的特异性结合. 武汉大学学报(理学版), 53(6): 711-716.
11. 李洋, 陈百玲, 颜克美, 罗光富, 蔡汝秀. (2003) . 辣根过氧化物酶催化过氧化氢氧化隐性亮绿显色反应的研究. 分析科学学报, 19(2):133-135.
12. 李洋, 罗立廷, 杨广笑, 汪越胜, 崔海荣, 郭明星, 何光源. (2006). 不同小麦品种耐铝性差异的比较研究. 麦类作物学报, 26 (5): 79-83.
13. 李洋, 王莲哲, 杨广笑, 何光源. (2006). 铝胁迫对小麦胚诱导及超微结构的影响. 生物技术, 16(5): 25-28.
联系方式:18907152709, 183839508@qq.com
陈凡
研究方向:
疫苗与诊断,感染性疾病,药物递送,生物小分子材料
主持或参加科研项目:
1.湖北省自然科学基金项目,2014CF230,结核分枝杆菌表面毒力蛋白鉴定,2014/01-2015/12,已结题,主持
2.国家自然科学基金面上项目,30970076,磷脂酰胆碱合成酶基因在细菌致病性中的作用与机理,2010/01-2012/12,已结题,参与
3.国家自然科学基金面上项目,30973669,新型靶向双功能抗体及其对类风湿关节炎的治疗,2010/01-2012/12,已结题,参与
4.国家地区科学基金项目,30960411,IL-10和IL-12基因修饰树突状细胞疫苗诱导Th1调节T细胞及治疗哮喘,2010/01-2012/12,已结题,参与
5.国家青年科学基金项目,30801014,我国汉族人群乳腺癌易感基因FGFR2单核苷酸多态性研究,2009/01-2011/12,已结题,主持
6.湖北省教育厅项目,20091001,放射免疫治疗丙肝相关肿瘤,2009/01-2011/12,已结题,主持
7.国家自然科学基金面上项目,30670098,丙型肝炎病毒包膜糖蛋白糖基化的免疫功能研究,2007/01-2009/12,已结题,参与
8.国家自然科学基金重点项目,20532020,糖肽的合成及其免疫学功能研究,2006/01-2010/12,已结题,参与
代表性研究成果(*通信作者)
(1) Chen F, Chen GX, Zhou J, Xue Y, Wu MX. Childhood Bacille Calmette-Guerin Vaccination and Its Association With Less Severe COVID-19 Pneumonia. Am J Prev Med. 2021, 61(3):e119-e126
(2) Wei Wang; Hou Ming Liu; Jing Zhou; Yu Guang Wang; Xi Feng; Hao Tang;
Qinying Yan; Rong Sheng Zhu; Yu Wei Wu; Xing Guo Wang; Dan He; Fan Chen*; Skin test of tuberculin purified protein derivatives with a dissolving microneedle-array patch, Drug Delivery and Translational Research, 2019, 9:
795-801. (*corresponding author)
(3) Qinying Yan; Zhigang Cheng; Houming Liu; Wanshui Shan; Zhide Cheng;
Xuyong Dai; Yun Xue; Fan Chen. Enhancement of Ag85B DNA vaccine immunogenicity against tuberculosis by dissolving microneedles in mice, Vaccine, 2018, 36:4471-4476. (*corresponding author)
(4) Qinying Yan, Houming Liu, Zhigang Cheng, Yun Xue, Zhide Cheng, Xuyong Dai, Wanshui Shan, Fan Chen*. Immunotherapeutic effect of BCG-polysaccharide nucleic acid powder on Mycobacterium tuberculosis-infected mice using microneedle patches. Drug Delivery. 2017, 24(1):1648–1653.(*corresponding author)
(5) Fan Chen, Qinying Yan, Yang Yu, Mei X. Wu. BCG vaccine powder-laden and dissolvable microneedle arrays for lesion free vaccination. J Control Release. 2017,255: 36–44
(6) Fan Chen, Si-Chong Chen, Jing Zhou, Zhi-De Chen, Fang Chen.
Identification of Aptamer-Binding Sites in Hepatitis C Virus Envelope Glycoprotein E2. Iran J Med Sci. 2015,40(1):63~67
(7) Chen F, Zhou J,Xue Y, Yang S, Xiong M, Li Y, Liu Q. A single nucleotide polymorphism of the TNRC9 gene associated with breast cancer risk in Chinese Han women. Genetics and Molecular Research. 2014, 13(1):182~187
(8) Chen Fan, Zhou Jing, Huang YongHao, Huang FengYing, Liu Qiang, Fang Zhigang, Yang Sheng, Xiong Min, Lin YingYing, Tan GuangHong. Function of ssDNA aptamer and aptamer pool against Mycobacterium tuberculosis in a mouse model. Molecular Medicine Reports. 2013,7(2):669~673
(9) Chen F, Liu Q, Xue Y, Huang YH, Huang FY, Lin Y.,Tan, G. H.,Zhou, J. ,Ficolin-A Enhances Inhibition of the C-Terminal 19kDa Region of Merozoite Surface Protein-1 of Plasmodium berghei Using Test In Vivo. IRANIAN JOURNAL OF PARASITOLOGY. 2013, 8(1):33~39
(10) Fan Chen,Lu Min,Yun Xue,Jing Zhou,Feifei Hu,Xin Chen,Zhanqin Zhao,Yang Li, Xingguo Wang. Genetic variants of fibroblast growth factor receptor 2 (FGFR2) are associated with breast cancer risk in Chinese women of the Han nationality,Immunogenetics. 2012,64(1):71~76
(11) Chen Fan, Zhang XiaoLian, Zhou Jing, Liu Shengwu, Liu Junyan. Aptamer inhibits Mycobacterium tuberculosis (H37Rv) invasion of macrophage. Molecular Biology Reports. 2012, 39(3):2157~2162
(12) Fan Chen, Qiong Zhao, Xueli Cai, Luchao Lv, Wen Lin, Xuejin Yu, Changyu Li, Yang LI, Min Xiong, XingGuo Wang. Phosphatidylcholine in membrane of Escherichia coli changes bacterial antigenicity,Can. J. Microbiol,2009,55(11):1328~1334
(13) Fan Chen, Jing Zhou, Fengling Luo, Al-Bayati Mohammed, Xiao-Lian Zhang. Aptamer from whole-bacterium SELEX as new therapeutic reagent against virulent Mycobacterium tuberculosis,Biochemical and Biophysical Research
Communications. 2007, 357(3):743~748
(14) 陈凡, 何建安, 董瑞玲, 等. SPR蛋白质芯片在输入性疟疾筛查中的应用. 生物工程学报, 2021, 37 (4): 1360-1367.
(15) 陈凡,王伟,顾大勇,等. 改性聚二甲基硅氧烷 (iPDMS) 蛋白芯片在肿瘤相关抗原自身抗体筛查中的应用. 生物工程学报, 2021, 37 (11): 4075-4028.
国家发明专利
1. 一种卡介苗干粉微针疫苗及其制备方法,申请号:201610717947.3;
2. 一种可溶性中空微针及其制备方法,申请号:201610718021.6;
3. 一种结核菌素微针贴片及其制备方法和应用,申请号:201711084669.3
4. 可溶性截短的人TRAIL活性蛋白的制备方法,申请号:201010243089.6
5. 抗结核杆菌感染的小分子核苷酸DNA适配子及其制备方法, 申请号:200910003994.1